Machine learning
- Python (Theano) code for learning Deep Markov Models (AAAI '17)
- Torch code for learning character-aware neural language models (AAAI '16)
- Python code for learning topic models (ICML '13). See also Mallet-compatible Java implementation
- Bayesian network structure learning (UAI '13).
- C++ code for MAP inference in graphical models (UAI '12). Readme file
Health care
Anchor
Explorer
Machine learning algorithm and user interface for
learning to predict clinical state variables without having to
label data(AMIA 2014, JAMIA 2016)
PatientViz
Tool for visualizing single patient longitudinal health
data (diagnosis codes, medications, procedures, laboratory test results)(AMIA 2015 abstract)
Embedding
Medicine
Low-dimensional representations of
thousands of medical concepts: diagnoses,
medications, labs. Like word embeddings,
but learned from medical claims(AMIA CRI 2016)